Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.19■□□□□ 0.34
Trim43cP86449 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim43cP86449 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm10819-201ENSMUST00000099988 561 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.19■□□□□ 0.34
Trim43cP86449 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Trim43cP86449 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim43cP86449 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim43cP86449 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim43cP86449 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trim43cP86449 Gm9103-201ENSMUST00000119371 405 ntBASIC17.18■□□□□ 0.34
Trim43cP86449 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim43cP86449 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim43cP86449 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trim43cP86449 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trim43cP86449 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43cP86449 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim43cP86449 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim43cP86449 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim43cP86449 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Gm4459-201ENSMUST00000118750 468 ntBASIC17.17■□□□□ 0.34
Trim43cP86449 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim43cP86449 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43cP86449 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim43cP86449 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim43cP86449 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.16■□□□□ 0.34
Trim43cP86449 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.16■□□□□ 0.34
Trim43cP86449 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim43cP86449 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43cP86449 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Trim43cP86449 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim43cP86449 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43cP86449 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms