Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.3□□□□□ -0.28
SgcaP82350 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SgcaP82350 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
SgcaP82350 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SgcaP82350 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SgcaP82350 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.29□□□□□ -0.28
SgcaP82350 Rubie-203ENSMUST00000227803 2430 ntBASIC13.29□□□□□ -0.28
SgcaP82350 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.29□□□□□ -0.28
SgcaP82350 Gm12085-201ENSMUST00000119263 940 ntBASIC13.29□□□□□ -0.28
SgcaP82350 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SgcaP82350 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.29□□□□□ -0.28
SgcaP82350 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SgcaP82350 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SgcaP82350 Actl10-202ENSMUST00000226583 1501 ntBASIC13.29□□□□□ -0.28
SgcaP82350 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SgcaP82350 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SgcaP82350 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.28□□□□□ -0.28
SgcaP82350 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SgcaP82350 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SgcaP82350 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SgcaP82350 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SgcaP82350 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
SgcaP82350 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SgcaP82350 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
SgcaP82350 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.27□□□□□ -0.28
SgcaP82350 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SgcaP82350 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SgcaP82350 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.27□□□□□ -0.28
SgcaP82350 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SgcaP82350 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SgcaP82350 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.27□□□□□ -0.29
SgcaP82350 Gm18666-201ENSMUST00000190039 958 ntBASIC13.27□□□□□ -0.29
SgcaP82350 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.27□□□□□ -0.29
SgcaP82350 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.27□□□□□ -0.29
SgcaP82350 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcaP82350 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SgcaP82350 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.27□□□□□ -0.29
SgcaP82350 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms