Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.36□□□□□ -0.27
Gabra1P62812 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabra1P62812 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabra1P62812 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Gabra1P62812 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabra1P62812 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.35□□□□□ -0.27
Gabra1P62812 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm18958-201ENSMUST00000174258 762 ntBASIC13.35□□□□□ -0.27
Gabra1P62812 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Gabra1P62812 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm43183-201ENSMUST00000200632 547 ntBASIC13.35□□□□□ -0.27
Gabra1P62812 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.35□□□□□ -0.27
Gabra1P62812 Il3ra-202ENSMUST00000223589 738 ntBASIC13.35□□□□□ -0.27
Gabra1P62812 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.35□□□□□ -0.27
Gabra1P62812 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Gabra1P62812 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Gabra1P62812 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gabra1P62812 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gabra1P62812 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.34□□□□□ -0.27
Gabra1P62812 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.34□□□□□ -0.27
Gabra1P62812 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.34□□□□□ -0.27
Gabra1P62812 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.34□□□□□ -0.27
Gabra1P62812 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.34□□□□□ -0.27
Gabra1P62812 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Gabra1P62812 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.34□□□□□ -0.27
Gabra1P62812 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.34□□□□□ -0.27
Gabra1P62812 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gabra1P62812 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.34□□□□□ -0.27
Gabra1P62812 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gabra1P62812 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Gabra1P62812 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Gabra1P62812 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Gabra1P62812 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Gabra1P62812 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Gabra1P62812 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gabra1P62812 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms