Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.88□□□□□ -0.19
Lsm6P62313 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.88□□□□□ -0.19
Lsm6P62313 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.88□□□□□ -0.19
Lsm6P62313 Gm25406-201ENSMUST00000157599 105 ntBASIC13.88□□□□□ -0.19
Lsm6P62313 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Lsm6P62313 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lsm6P62313 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm6P62313 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lsm6P62313 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lsm6P62313 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.87□□□□□ -0.19
Lsm6P62313 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Lsm6P62313 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Gm33142-201ENSMUST00000193913 867 ntBASIC13.87□□□□□ -0.19
Lsm6P62313 Gm44454-201ENSMUST00000198541 138 ntBASIC13.87□□□□□ -0.19
Lsm6P62313 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Lsm6P62313 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.87□□□□□ -0.19
Lsm6P62313 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lsm6P62313 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Lsm6P62313 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm6P62313 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm6P62313 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm6P62313 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Prob1-201ENSMUST00000097619 3021 ntBASIC13.86□□□□□ -0.19
Lsm6P62313 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.86□□□□□ -0.19
Lsm6P62313 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lsm6P62313 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Lsm6P62313 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.86□□□□□ -0.19
Lsm6P62313 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.86□□□□□ -0.19
Lsm6P62313 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.86□□□□□ -0.19
Lsm6P62313 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Lsm6P62313 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.86□□□□□ -0.19
Lsm6P62313 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.86□□□□□ -0.19
Lsm6P62313 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm6P62313 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lsm6P62313 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.85□□□□□ -0.19
Lsm6P62313 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.85□□□□□ -0.19
Lsm6P62313 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.85□□□□□ -0.19
Lsm6P62313 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lsm6P62313 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms