Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Lsm3P62311 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Lsm3P62311 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Lsm3P62311 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Gm7290-201ENSMUST00000104990 617 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Gm12918-201ENSMUST00000120234 636 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Gm15710-201ENSMUST00000121821 636 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Gm5075-201ENSMUST00000196916 622 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.49□□□□□ -0.09
Lsm3P62311 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Lsm3P62311 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lsm3P62311 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Lsm3P62311 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.48□□□□□ -0.09
Lsm3P62311 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.48□□□□□ -0.09
Lsm3P62311 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.48□□□□□ -0.09
Lsm3P62311 Gm26524-201ENSMUST00000192339 390 ntBASIC14.48□□□□□ -0.09
Lsm3P62311 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.48□□□□□ -0.09
Lsm3P62311 Gm37025-201ENSMUST00000195159 829 ntBASIC14.48□□□□□ -0.09
Lsm3P62311 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.48□□□□□ -0.09
Lsm3P62311 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.48□□□□□ -0.09
Lsm3P62311 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lsm3P62311 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm3P62311 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.47□□□□□ -0.09
Lsm3P62311 Gm42545-201ENSMUST00000202755 922 ntBASIC14.47□□□□□ -0.09
Lsm3P62311 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Lsm3P62311 Rab3c-203ENSMUST00000224180 967 ntBASIC14.47□□□□□ -0.09
Lsm3P62311 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Lsm3P62311 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Lsm3P62311 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lsm3P62311 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lsm3P62311 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lsm3P62311 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lsm3P62311 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms