Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.98□□□□□ -0.17
Sec61a1P61620 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sec61a1P61620 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sec61a1P61620 Actl10-202ENSMUST00000226583 1501 ntBASIC13.97□□□□□ -0.17
Sec61a1P61620 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sec61a1P61620 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Gm27000-201ENSMUST00000182943 842 ntBASIC13.97□□□□□ -0.17
Sec61a1P61620 Gm21362-201ENSMUST00000194272 928 ntBASIC13.97□□□□□ -0.17
Sec61a1P61620 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sec61a1P61620 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.97□□□□□ -0.17
Sec61a1P61620 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sec61a1P61620 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sec61a1P61620 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Sec61a1P61620 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.96□□□□□ -0.17
Sec61a1P61620 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Gm26039-201ENSMUST00000158152 144 ntBASIC13.96□□□□□ -0.17
Sec61a1P61620 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sec61a1P61620 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sec61a1P61620 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sec61a1P61620 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sec61a1P61620 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Gm10819-201ENSMUST00000099988 561 ntBASIC13.95□□□□□ -0.18
Sec61a1P61620 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.95□□□□□ -0.18
Sec61a1P61620 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sec61a1P61620 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sec61a1P61620 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sec61a1P61620 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sec61a1P61620 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms