Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nup43P59235 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nup43P59235 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.94□□□□□ -0.02
Nup43P59235 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.94□□□□□ -0.02
Nup43P59235 Gm34391-201ENSMUST00000203706 907 ntBASIC14.94□□□□□ -0.02
Nup43P59235 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.94□□□□□ -0.02
Nup43P59235 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Birc2-201ENSMUST00000054878 378 ntBASIC14.94□□□□□ -0.02
Nup43P59235 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nup43P59235 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.94□□□□□ -0.02
Nup43P59235 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nup43P59235 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nup43P59235 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nup43P59235 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nup43P59235 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm24589-201ENSMUST00000116692 94 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.93□□□□□ -0.02
Nup43P59235 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm8825-201ENSMUST00000182565 998 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm4518-201ENSMUST00000182638 718 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.93□□□□□ -0.02
Nup43P59235 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Nup43P59235 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.93□□□□□ -0.02
Nup43P59235 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nup43P59235 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nup43P59235 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.92□□□□□ -0.02
Nup43P59235 Gm4459-201ENSMUST00000118750 468 ntBASIC14.92□□□□□ -0.02
Nup43P59235 Gm12497-201ENSMUST00000138778 237 ntBASIC14.92□□□□□ -0.02
Nup43P59235 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Nup43P59235 Gm43347-201ENSMUST00000200226 580 ntBASIC14.92□□□□□ -0.02
Nup43P59235 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.92□□□□□ -0.02
Nup43P59235 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nup43P59235 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nup43P59235 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nup43P59235 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms