Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.83□□□□□ -0.36
Sssca1P56873 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.83□□□□□ -0.36
Sssca1P56873 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sssca1P56873 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Gm16061-201ENSMUST00000122167 857 ntBASIC12.82□□□□□ -0.36
Sssca1P56873 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Gm2274-201ENSMUST00000184539 609 ntBASIC12.82□□□□□ -0.36
Sssca1P56873 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.82□□□□□ -0.36
Sssca1P56873 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sssca1P56873 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sssca1P56873 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sssca1P56873 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sssca1P56873 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.81□□□□□ -0.36
Sssca1P56873 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sssca1P56873 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.81□□□□□ -0.36
Sssca1P56873 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.81□□□□□ -0.36
Sssca1P56873 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Sssca1P56873 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm7213-201ENSMUST00000215977 950 ntBASIC12.81□□□□□ -0.36
Sssca1P56873 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sssca1P56873 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sssca1P56873 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.81□□□□□ -0.36
Sssca1P56873 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sssca1P56873 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.8□□□□□ -0.36
Sssca1P56873 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sssca1P56873 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.8□□□□□ -0.36
Sssca1P56873 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms