Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Gm8097-201ENSMUST00000117903 829 ntBASIC14.16□□□□□ -0.14
Cldn18P56857 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.16□□□□□ -0.14
Cldn18P56857 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn18P56857 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn18P56857 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.16□□□□□ -0.14
Cldn18P56857 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.16□□□□□ -0.14
Cldn18P56857 Gm18622-201ENSMUST00000219361 595 ntBASIC14.16□□□□□ -0.14
Cldn18P56857 Gm8655-201ENSMUST00000221159 852 ntBASIC14.16□□□□□ -0.14
Cldn18P56857 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.16□□□□□ -0.14
Cldn18P56857 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cldn18P56857 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cldn18P56857 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn18P56857 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.15□□□□□ -0.14
Cldn18P56857 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44357-201ENSMUST00000195897 142 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm19658-201ENSMUST00000196231 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44367-201ENSMUST00000196836 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44350-201ENSMUST00000197197 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44390-201ENSMUST00000197533 144 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44313-201ENSMUST00000198018 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44486-201ENSMUST00000198508 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44314-201ENSMUST00000199263 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44394-201ENSMUST00000199558 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44484-201ENSMUST00000199873 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44466-201ENSMUST00000200264 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Gm44359-201ENSMUST00000200671 138 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn18P56857 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.15□□□□□ -0.14
Cldn18P56857 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldn18P56857 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Cldn18P56857 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cldn18P56857 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldn18P56857 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.15□□□□□ -0.15
Cldn18P56857 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cldn18P56857 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.14□□□□□ -0.15
Cldn18P56857 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldn18P56857 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldn18P56857 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Cldn18P56857 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Cldn18P56857 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.14□□□□□ -0.15
Cldn18P56857 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldn18P56857 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldn18P56857 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Cldn18P56857 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn18P56857 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldn18P56857 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cldn18P56857 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cldn18P56857 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 168.5 ms