Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Gm6257-201ENSMUST00000163864 910 ntBASIC15.17■□□□□ 0.02
Cdkn2bP55271 Gm43799-201ENSMUST00000201845 579 ntBASIC15.17■□□□□ 0.02
Cdkn2bP55271 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn2bP55271 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Gm11355-201ENSMUST00000121120 306 ntBASIC15.16■□□□□ 0.02
Cdkn2bP55271 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn2bP55271 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.15■□□□□ 0.02
Cdkn2bP55271 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.15■□□□□ 0.02
Cdkn2bP55271 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn2bP55271 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Cdkn2bP55271 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.14■□□□□ 0.01
Cdkn2bP55271 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn2bP55271 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms