Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd3P55096 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Olfr129-201ENSMUST00000122318 993 ntBASIC14.15□□□□□ -0.14
Abcd3P55096 Mir3081-201ENSMUST00000175305 84 ntBASIC14.15□□□□□ -0.14
Abcd3P55096 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.15□□□□□ -0.14
Abcd3P55096 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.15□□□□□ -0.14
Abcd3P55096 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.15□□□□□ -0.14
Abcd3P55096 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Abcd3P55096 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd3P55096 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Abcd3P55096 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Rprl3-201ENSMUST00000157400 290 ntBASIC14.14□□□□□ -0.15
Abcd3P55096 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.14□□□□□ -0.15
Abcd3P55096 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.14□□□□□ -0.15
Abcd3P55096 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Abcd3P55096 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Abcd3P55096 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Abcd3P55096 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.13□□□□□ -0.15
Abcd3P55096 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.13□□□□□ -0.15
Abcd3P55096 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.13□□□□□ -0.15
Abcd3P55096 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Abcd3P55096 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.13□□□□□ -0.15
Abcd3P55096 Gm7367-201ENSMUST00000057611 492 ntBASIC14.13□□□□□ -0.15
Abcd3P55096 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.13□□□□□ -0.15
Abcd3P55096 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Abcd3P55096 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Abcd3P55096 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Abcd3P55096 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms