Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Msh6P54276 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.96■□□□□ 0.79
Msh6P54276 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.96■□□□□ 0.79
Msh6P54276 Gm9682-201ENSMUST00000197505 556 ntBASIC19.96■□□□□ 0.79
Msh6P54276 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Gm45612-201ENSMUST00000211320 160 ntBASIC19.96■□□□□ 0.79
Msh6P54276 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Msh6P54276 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Msh6P54276 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.96■□□□□ 0.79
Msh6P54276 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.96■□□□□ 0.79
Msh6P54276 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msh6P54276 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Msh6P54276 Gm13616-201ENSMUST00000120600 222 ntBASIC19.95■□□□□ 0.79
Msh6P54276 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.95■□□□□ 0.79
Msh6P54276 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Msh6P54276 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Msh6P54276 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Msh6P54276 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
Msh6P54276 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.95■□□□□ 0.79
Msh6P54276 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.95■□□□□ 0.78
Msh6P54276 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
Msh6P54276 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.95■□□□□ 0.78
Msh6P54276 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Msh6P54276 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.95■□□□□ 0.78
Msh6P54276 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Msh6P54276 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Msh6P54276 Gm18489-201ENSMUST00000172565 551 ntBASIC19.95■□□□□ 0.78
Msh6P54276 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.95■□□□□ 0.78
Msh6P54276 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Msh6P54276 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC19.95■□□□□ 0.78
Msh6P54276 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.95■□□□□ 0.78
Msh6P54276 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.94■□□□□ 0.78
Msh6P54276 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.94■□□□□ 0.78
Msh6P54276 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.94■□□□□ 0.78
Msh6P54276 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Msh6P54276 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Msh6P54276 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.93■□□□□ 0.78
Msh6P54276 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Msh6P54276 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.92■□□□□ 0.78
Msh6P54276 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Msh6P54276 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms