Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdx1P52946 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.65■□□□□ 0.1
Pdx1P52946 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdx1P52946 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pdx1P52946 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pdx1P52946 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pdx1P52946 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdx1P52946 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Pdx1P52946 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Gm6257-201ENSMUST00000163864 910 ntBASIC15.64■□□□□ 0.09
Pdx1P52946 Gm34391-201ENSMUST00000203706 907 ntBASIC15.64■□□□□ 0.09
Pdx1P52946 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.64■□□□□ 0.09
Pdx1P52946 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pdx1P52946 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pdx1P52946 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdx1P52946 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pdx1P52946 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pdx1P52946 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Pdx1P52946 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pdx1P52946 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Gm17971-201ENSMUST00000190239 806 ntBASIC15.63■□□□□ 0.09
Pdx1P52946 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.63■□□□□ 0.09
Pdx1P52946 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.63■□□□□ 0.09
Pdx1P52946 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.63■□□□□ 0.09
Pdx1P52946 Gm9172-201ENSMUST00000212092 954 ntBASIC15.63■□□□□ 0.09
Pdx1P52946 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pdx1P52946 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pdx1P52946 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdx1P52946 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.63■□□□□ 0.09
Pdx1P52946 App-207ENSMUST00000227737 2827 ntBASIC15.63■□□□□ 0.09
Pdx1P52946 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pdx1P52946 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdx1P52946 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.62■□□□□ 0.09
Pdx1P52946 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.62■□□□□ 0.09
Pdx1P52946 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.62■□□□□ 0.09
Pdx1P52946 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pdx1P52946 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pdx1P52946 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.62■□□□□ 0.09
Pdx1P52946 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdx1P52946 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms