Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.77■□□□□ 0.6
Ercc3P49135 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.77■□□□□ 0.6
Ercc3P49135 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.77■□□□□ 0.6
Ercc3P49135 Gm5864-201ENSMUST00000202263 970 ntBASIC18.77■□□□□ 0.6
Ercc3P49135 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.77■□□□□ 0.6
Ercc3P49135 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ercc3P49135 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.77■□□□□ 0.6
Ercc3P49135 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ercc3P49135 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ercc3P49135 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ercc3P49135 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.76■□□□□ 0.59
Ercc3P49135 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.76■□□□□ 0.59
Ercc3P49135 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ercc3P49135 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.76■□□□□ 0.59
Ercc3P49135 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.76■□□□□ 0.59
Ercc3P49135 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ercc3P49135 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.75■□□□□ 0.59
Ercc3P49135 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.75■□□□□ 0.59
Ercc3P49135 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.75■□□□□ 0.59
Ercc3P49135 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ercc3P49135 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.75■□□□□ 0.59
Ercc3P49135 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ercc3P49135 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.74■□□□□ 0.59
Ercc3P49135 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.74■□□□□ 0.59
Ercc3P49135 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm4459-201ENSMUST00000118750 468 ntBASIC18.74■□□□□ 0.59
Ercc3P49135 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.74■□□□□ 0.59
Ercc3P49135 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.74■□□□□ 0.59
Ercc3P49135 App-207ENSMUST00000227737 2827 ntBASIC18.74■□□□□ 0.59
Ercc3P49135 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.74■□□□□ 0.59
Ercc3P49135 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ercc3P49135 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ercc3P49135 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.73■□□□□ 0.59
Ercc3P49135 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.73■□□□□ 0.59
Ercc3P49135 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.73■□□□□ 0.59
Ercc3P49135 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ercc3P49135 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ercc3P49135 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ercc3P49135 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.72■□□□□ 0.59
Ercc3P49135 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ercc3P49135 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms