Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LmnaP48678 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LmnaP48678 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Gm14494-201ENSMUST00000118786 435 ntBASIC16.39■□□□□ 0.21
LmnaP48678 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Gm26308-201ENSMUST00000157768 69 ntBASIC16.39■□□□□ 0.21
LmnaP48678 Gm27867-201ENSMUST00000184778 125 ntBASIC16.39■□□□□ 0.21
LmnaP48678 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.39■□□□□ 0.21
LmnaP48678 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LmnaP48678 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.39■□□□□ 0.21
LmnaP48678 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LmnaP48678 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LmnaP48678 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LmnaP48678 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LmnaP48678 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.38■□□□□ 0.21
LmnaP48678 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.38■□□□□ 0.21
LmnaP48678 Gm15165-201ENSMUST00000118140 502 ntBASIC16.38■□□□□ 0.21
LmnaP48678 Gm15920-201ENSMUST00000118998 402 ntBASIC16.38■□□□□ 0.21
LmnaP48678 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.38■□□□□ 0.21
LmnaP48678 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.38■□□□□ 0.21
LmnaP48678 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.38■□□□□ 0.21
LmnaP48678 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.38■□□□□ 0.21
LmnaP48678 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.38■□□□□ 0.21
LmnaP48678 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LmnaP48678 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.38■□□□□ 0.21
LmnaP48678 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LmnaP48678 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.38■□□□□ 0.21
LmnaP48678 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.37■□□□□ 0.21
LmnaP48678 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.37■□□□□ 0.21
LmnaP48678 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
LmnaP48678 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LmnaP48678 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LmnaP48678 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.37■□□□□ 0.21
LmnaP48678 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LmnaP48678 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.36■□□□□ 0.21
LmnaP48678 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.36■□□□□ 0.21
LmnaP48678 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
LmnaP48678 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.36■□□□□ 0.21
LmnaP48678 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LmnaP48678 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.36■□□□□ 0.21
LmnaP48678 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.36■□□□□ 0.21
LmnaP48678 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms