Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hist1h1dP43277 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Hist1h1dP43277 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hist1h1dP43277 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.4□□□□□ -0.26
Hist1h1dP43277 Gm13436-201ENSMUST00000120418 567 ntBASIC13.4□□□□□ -0.26
Hist1h1dP43277 Gm22240-201ENSMUST00000175225 82 ntBASIC13.4□□□□□ -0.26
Hist1h1dP43277 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hist1h1dP43277 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hist1h1dP43277 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.39□□□□□ -0.27
Hist1h1dP43277 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hist1h1dP43277 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hist1h1dP43277 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms