Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.75■□□□□ 0.27
HttP42859 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HttP42859 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.75■□□□□ 0.27
HttP42859 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HttP42859 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.75■□□□□ 0.27
HttP42859 Gm14042-201ENSMUST00000120139 833 ntBASIC16.75■□□□□ 0.27
HttP42859 Gm8515-201ENSMUST00000194852 576 ntBASIC16.75■□□□□ 0.27
HttP42859 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HttP42859 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.74■□□□□ 0.27
HttP42859 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.74■□□□□ 0.27
HttP42859 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
HttP42859 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HttP42859 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HttP42859 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
HttP42859 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
HttP42859 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.74■□□□□ 0.27
HttP42859 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HttP42859 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.73■□□□□ 0.27
HttP42859 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.73■□□□□ 0.27
HttP42859 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.73■□□□□ 0.27
HttP42859 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HttP42859 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.73■□□□□ 0.27
HttP42859 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.73■□□□□ 0.27
HttP42859 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.73■□□□□ 0.27
HttP42859 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.73■□□□□ 0.27
HttP42859 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.73■□□□□ 0.27
HttP42859 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.73■□□□□ 0.27
HttP42859 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HttP42859 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HttP42859 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.72■□□□□ 0.27
HttP42859 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.72■□□□□ 0.27
HttP42859 Gm27533-201ENSMUST00000183800 152 ntBASIC16.72■□□□□ 0.27
HttP42859 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HttP42859 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.72■□□□□ 0.27
HttP42859 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.72■□□□□ 0.27
HttP42859 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
HttP42859 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Gm18737-201ENSMUST00000173594 937 ntBASIC16.72■□□□□ 0.27
HttP42859 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HttP42859 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HttP42859 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HttP42859 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HttP42859 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HttP42859 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.71■□□□□ 0.27
HttP42859 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HttP42859 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HttP42859 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HttP42859 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms