Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox6P40645 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.89□□□□□ -0.03
Sox6P40645 Phf7-203ENSMUST00000226565 1971 ntBASIC14.89□□□□□ -0.03
Sox6P40645 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox6P40645 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox6P40645 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Gm11355-201ENSMUST00000121120 306 ntBASIC14.89□□□□□ -0.03
Sox6P40645 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox6P40645 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox6P40645 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox6P40645 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox6P40645 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox6P40645 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox6P40645 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sox6P40645 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox6P40645 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox6P40645 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox6P40645 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox6P40645 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.88□□□□□ -0.03
Sox6P40645 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox6P40645 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.88□□□□□ -0.03
Sox6P40645 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox6P40645 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox6P40645 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox6P40645 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sox6P40645 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Gm11336-201ENSMUST00000118168 334 ntBASIC14.87□□□□□ -0.03
Sox6P40645 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sox6P40645 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox6P40645 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox6P40645 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox6P40645 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms