Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn1aP39689 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Gm1401-201ENSMUST00000122048 772 ntBASIC13.02□□□□□ -0.33
Cdkn1aP39689 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.02□□□□□ -0.33
Cdkn1aP39689 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 AV026068-213ENSMUST00000223675 1171 ntBASIC13.02□□□□□ -0.33
Cdkn1aP39689 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn1aP39689 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.01□□□□□ -0.33
Cdkn1aP39689 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Gm27646-201ENSMUST00000183989 110 ntBASIC13.01□□□□□ -0.33
Cdkn1aP39689 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn1aP39689 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13□□□□□ -0.33
Cdkn1aP39689 Gm6184-201ENSMUST00000120403 1261 ntBASIC13□□□□□ -0.33
Cdkn1aP39689 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13□□□□□ -0.33
Cdkn1aP39689 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdkn1aP39689 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdkn1aP39689 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdkn1aP39689 Haglr-201ENSMUST00000100000 2085 ntBASIC13□□□□□ -0.33
Cdkn1aP39689 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms