Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Foxa1P35582 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Foxa1P35582 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.63□□□□□ -0.07
Foxa1P35582 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Foxa1P35582 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.63□□□□□ -0.07
Foxa1P35582 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.63□□□□□ -0.07
Foxa1P35582 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Foxa1P35582 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.62□□□□□ -0.07
Foxa1P35582 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Foxa1P35582 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.62□□□□□ -0.07
Foxa1P35582 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Foxa1P35582 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Foxa1P35582 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Foxa1P35582 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.62□□□□□ -0.07
Foxa1P35582 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.62□□□□□ -0.07
Foxa1P35582 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.62□□□□□ -0.07
Foxa1P35582 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxa1P35582 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm8825-201ENSMUST00000182565 998 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm4518-201ENSMUST00000182638 718 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm17971-201ENSMUST00000190239 806 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.61□□□□□ -0.07
Foxa1P35582 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.61□□□□□ -0.07
Foxa1P35582 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.61□□□□□ -0.07
Foxa1P35582 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.61□□□□□ -0.07
Foxa1P35582 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Foxa1P35582 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Foxa1P35582 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Foxa1P35582 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms