Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rom1P32958 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rom1P32958 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rom1P32958 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rom1P32958 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Rom1P32958 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rom1P32958 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rom1P32958 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rom1P32958 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rom1P32958 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Rom1P32958 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rom1P32958 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Gm18421-201ENSMUST00000204122 625 ntBASIC12.54□□□□□ -0.4
Rom1P32958 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rom1P32958 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rom1P32958 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 BC037039-201ENSMUST00000192003 2205 ntBASIC12.54□□□□□ -0.4
Rom1P32958 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rom1P32958 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Rom1P32958 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.53□□□□□ -0.4
Rom1P32958 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rom1P32958 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Rom1P32958 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.53□□□□□ -0.4
Rom1P32958 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rom1P32958 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Rom1P32958 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.52□□□□□ -0.4
Rom1P32958 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rom1P32958 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms