Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.06■□□□□ 0.16
Slc6a13P31649 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Slc6a13P31649 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Slc6a13P31649 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.05■□□□□ 0.16
Slc6a13P31649 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Slc6a13P31649 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.05■□□□□ 0.16
Slc6a13P31649 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.05■□□□□ 0.16
Slc6a13P31649 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Slc6a13P31649 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Slc6a13P31649 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Slc6a13P31649 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.04■□□□□ 0.16
Slc6a13P31649 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slc6a13P31649 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Slc6a13P31649 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Slc6a13P31649 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Slc6a13P31649 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.03■□□□□ 0.16
Slc6a13P31649 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Slc6a13P31649 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.02■□□□□ 0.16
Slc6a13P31649 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.02■□□□□ 0.16
Slc6a13P31649 Gm24589-201ENSMUST00000116692 94 ntBASIC16.02■□□□□ 0.16
Slc6a13P31649 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Slc6a13P31649 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Slc6a13P31649 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Slc6a13P31649 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a13P31649 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a13P31649 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Slc6a13P31649 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Slc6a13P31649 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Slc6a13P31649 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms