Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Nckap1P28660 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nckap1P28660 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Nckap1P28660 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nckap1P28660 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.71■□□□□ 0.11
Nckap1P28660 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Nckap1P28660 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.71■□□□□ 0.11
Nckap1P28660 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nckap1P28660 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nckap1P28660 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nckap1P28660 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
Nckap1P28660 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.7■□□□□ 0.1
Nckap1P28660 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.7■□□□□ 0.1
Nckap1P28660 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nckap1P28660 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nckap1P28660 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Nckap1P28660 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.7■□□□□ 0.1
Nckap1P28660 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.7■□□□□ 0.1
Nckap1P28660 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nckap1P28660 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nckap1P28660 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Gm11764-201ENSMUST00000120221 623 ntBASIC15.69■□□□□ 0.1
Nckap1P28660 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Nckap1P28660 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.69■□□□□ 0.1
Nckap1P28660 Gm9727-201ENSMUST00000161387 555 ntBASIC15.69■□□□□ 0.1
Nckap1P28660 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nckap1P28660 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.69■□□□□ 0.1
Nckap1P28660 Gm27646-201ENSMUST00000183989 110 ntBASIC15.69■□□□□ 0.1
Nckap1P28660 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.69■□□□□ 0.1
Nckap1P28660 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.69■□□□□ 0.1
Nckap1P28660 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.69■□□□□ 0.1
Nckap1P28660 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.69■□□□□ 0.1
Nckap1P28660 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nckap1P28660 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nckap1P28660 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms