Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ccl6P27784 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.37□□□□□ -0.43
Ccl6P27784 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccl6P27784 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.37□□□□□ -0.43
Ccl6P27784 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccl6P27784 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccl6P27784 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl6P27784 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 App-207ENSMUST00000227737 2827 ntBASIC12.36□□□□□ -0.43
Ccl6P27784 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccl6P27784 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.36□□□□□ -0.43
Ccl6P27784 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ccl6P27784 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Gm44430-201ENSMUST00000203376 995 ntBASIC12.36□□□□□ -0.43
Ccl6P27784 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccl6P27784 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl6P27784 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.36□□□□□ -0.43
Ccl6P27784 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl6P27784 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccl6P27784 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.36□□□□□ -0.43
Ccl6P27784 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccl6P27784 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl6P27784 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccl6P27784 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccl6P27784 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.35□□□□□ -0.43
Ccl6P27784 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccl6P27784 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.35□□□□□ -0.43
Ccl6P27784 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Ccl6P27784 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Ccl6P27784 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.35□□□□□ -0.43
Ccl6P27784 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccl6P27784 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl6P27784 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.34□□□□□ -0.43
Ccl6P27784 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccl6P27784 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.34□□□□□ -0.43
Ccl6P27784 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl6P27784 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccl6P27784 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccl6P27784 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccl6P27784 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccl6P27784 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms