Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Gm4459-201ENSMUST00000118750 468 ntBASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Gm12497-201ENSMUST00000138778 237 ntBASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf1bP25119 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm6257-201ENSMUST00000163864 910 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm8825-201ENSMUST00000182565 998 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm4518-201ENSMUST00000182638 718 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf1bP25119 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tnfrsf1bP25119 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms