Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
P20040 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P20040 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Gm14859-201ENSMUST00000117752 357 ntBASIC14.09□□□□□ -0.15
P20040 Gm21362-201ENSMUST00000194272 928 ntBASIC14.09□□□□□ -0.15
P20040 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
P20040 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
P20040 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
P20040 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.09□□□□□ -0.15
P20040 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P20040 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
P20040 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
P20040 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P20040 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.08□□□□□ -0.15
P20040 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.08□□□□□ -0.16
P20040 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.08□□□□□ -0.16
P20040 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P20040 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Gm6623-201ENSMUST00000173570 544 ntBASIC14.08□□□□□ -0.16
P20040 Gm17808-201ENSMUST00000200859 894 ntBASIC14.08□□□□□ -0.16
P20040 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P20040 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
P20040 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
P20040 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P20040 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P20040 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Mir770-201ENSMUST00000103252 94 ntBASIC14.07□□□□□ -0.16
P20040 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Gm11950-201ENSMUST00000121615 838 ntBASIC14.07□□□□□ -0.16
P20040 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.07□□□□□ -0.16
P20040 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P20040 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
P20040 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P20040 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
P20040 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P20040 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.06□□□□□ -0.16
P20040 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
P20040 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P20040 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms