Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TpbpaP13438 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Gm16061-201ENSMUST00000122167 857 ntBASIC14.38□□□□□ -0.11
TpbpaP13438 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TpbpaP13438 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Gm18421-201ENSMUST00000204122 625 ntBASIC14.38□□□□□ -0.11
TpbpaP13438 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.38□□□□□ -0.11
TpbpaP13438 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TpbpaP13438 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.38□□□□□ -0.11
TpbpaP13438 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TpbpaP13438 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TpbpaP13438 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.38□□□□□ -0.11
TpbpaP13438 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.38□□□□□ -0.11
TpbpaP13438 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TpbpaP13438 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.37□□□□□ -0.11
TpbpaP13438 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TpbpaP13438 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TpbpaP13438 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.37□□□□□ -0.11
TpbpaP13438 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.37□□□□□ -0.11
TpbpaP13438 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Gm7213-201ENSMUST00000215977 950 ntBASIC14.37□□□□□ -0.11
TpbpaP13438 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TpbpaP13438 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TpbpaP13438 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TpbpaP13438 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TpbpaP13438 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TpbpaP13438 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Gm11336-201ENSMUST00000118168 334 ntBASIC14.36□□□□□ -0.11
TpbpaP13438 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.36□□□□□ -0.11
TpbpaP13438 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.36□□□□□ -0.11
TpbpaP13438 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.36□□□□□ -0.11
TpbpaP13438 Gm7370-201ENSMUST00000219471 767 ntBASIC14.36□□□□□ -0.11
TpbpaP13438 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.36□□□□□ -0.11
TpbpaP13438 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TpbpaP13438 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TpbpaP13438 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
TpbpaP13438 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms