Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.16■□□□□ 0.18
Rb1P13405 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.16■□□□□ 0.18
Rb1P13405 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.16■□□□□ 0.18
Rb1P13405 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rb1P13405 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.16■□□□□ 0.18
Rb1P13405 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rb1P13405 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rb1P13405 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.15■□□□□ 0.18
Rb1P13405 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rb1P13405 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.15■□□□□ 0.18
Rb1P13405 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.15■□□□□ 0.18
Rb1P13405 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.15■□□□□ 0.18
Rb1P13405 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.15■□□□□ 0.18
Rb1P13405 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.15■□□□□ 0.18
Rb1P13405 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.15■□□□□ 0.18
Rb1P13405 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Rb1P13405 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rb1P13405 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.15■□□□□ 0.18
Rb1P13405 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.14■□□□□ 0.17
Rb1P13405 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rb1P13405 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Rb1P13405 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.14■□□□□ 0.17
Rb1P13405 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Gm10060-201ENSMUST00000212002 111 ntBASIC16.14■□□□□ 0.17
Rb1P13405 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.14■□□□□ 0.17
Rb1P13405 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.14■□□□□ 0.17
Rb1P13405 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.14■□□□□ 0.17
Rb1P13405 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rb1P13405 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rb1P13405 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rb1P13405 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rb1P13405 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms