Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Gm15427-201ENSMUST00000117288 531 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccl3P10855 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccl3P10855 Mir6956-201ENSMUST00000183598 62 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 Gm27301-201ENSMUST00000184012 127 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
Ccl3P10855 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.93□□□□□ -0.18
Ccl3P10855 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ccl3P10855 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccl3P10855 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccl3P10855 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.92□□□□□ -0.18
Ccl3P10855 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccl3P10855 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccl3P10855 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.92□□□□□ -0.18
Ccl3P10855 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccl3P10855 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccl3P10855 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Ccl3P10855 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.91□□□□□ -0.18
Ccl3P10855 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccl3P10855 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Ccl3P10855 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.91□□□□□ -0.18
Ccl3P10855 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ccl3P10855 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccl3P10855 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.9□□□□□ -0.18
Ccl3P10855 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccl3P10855 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms