Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.67□□□□□ -0.06
Cdh3P10287 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.67□□□□□ -0.06
Cdh3P10287 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cdh3P10287 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh3P10287 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cdh3P10287 Phf7-203ENSMUST00000226565 1971 ntBASIC14.67□□□□□ -0.06
Cdh3P10287 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh3P10287 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdh3P10287 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cdh3P10287 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cdh3P10287 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cdh3P10287 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Gm7977-201ENSMUST00000193787 748 ntBASIC14.66□□□□□ -0.06
Cdh3P10287 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh3P10287 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh3P10287 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdh3P10287 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Cdh3P10287 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.65□□□□□ -0.06
Cdh3P10287 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdh3P10287 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cdh3P10287 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm13186-201ENSMUST00000118031 316 ntBASIC14.65□□□□□ -0.06
Cdh3P10287 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh3P10287 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh3P10287 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.64□□□□□ -0.07
Cdh3P10287 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh3P10287 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.64□□□□□ -0.07
Cdh3P10287 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh3P10287 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms