Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P06344 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
P06344 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.08□□□□□ -0.16
P06344 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.08□□□□□ -0.16
P06344 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
P06344 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P06344 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
P06344 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.07□□□□□ -0.16
P06344 Gm8097-201ENSMUST00000117903 829 ntBASIC14.07□□□□□ -0.16
P06344 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
P06344 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.07□□□□□ -0.16
P06344 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.07□□□□□ -0.16
P06344 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P06344 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.07□□□□□ -0.16
P06344 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
P06344 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.07□□□□□ -0.16
P06344 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
P06344 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P06344 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
P06344 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Gm7862-201ENSMUST00000121461 292 ntBASIC14.06□□□□□ -0.16
P06344 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.06□□□□□ -0.16
P06344 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
P06344 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Gm4535-201ENSMUST00000182274 558 ntBASIC14.06□□□□□ -0.16
P06344 Gm18195-201ENSMUST00000207604 706 ntBASIC14.06□□□□□ -0.16
P06344 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P06344 Gm10355-201ENSMUST00000097146 517 ntBASIC14.06□□□□□ -0.16
P06344 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
P06344 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.06□□□□□ -0.16
P06344 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P06344 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.05□□□□□ -0.16
P06344 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.05□□□□□ -0.16
P06344 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
P06344 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.05□□□□□ -0.16
P06344 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P06344 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms