Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC10.03□□□□□ -0.8
P06320 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.03□□□□□ -0.8
P06320 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.03□□□□□ -0.8
P06320 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.03□□□□□ -0.8
P06320 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Dio3-201ENSMUST00000097228 1449 ntBASIC10.03□□□□□ -0.8
P06320 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.03□□□□□ -0.8
P06320 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
P06320 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P06320 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P06320 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.02□□□□□ -0.8
P06320 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
P06320 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 App-207ENSMUST00000227737 2827 ntBASIC10.02□□□□□ -0.8
P06320 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
P06320 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P06320 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06320 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.02□□□□□ -0.81
P06320 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.02□□□□□ -0.81
P06320 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC10.02□□□□□ -0.81
P06320 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
P06320 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.02□□□□□ -0.81
P06320 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06320 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.02□□□□□ -0.81
P06320 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06320 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
P06320 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P06320 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P06320 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
P06320 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P06320 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.01□□□□□ -0.81
P06320 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Gm13158-201ENSMUST00000122007 736 ntBASIC10.01□□□□□ -0.81
P06320 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.01□□□□□ -0.81
P06320 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC10.01□□□□□ -0.81
P06320 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P06320 Gm18958-201ENSMUST00000174258 762 ntBASIC10.01□□□□□ -0.81
P06320 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms