Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.53□□□□□ -0.4
P01788 Gm13436-201ENSMUST00000120418 567 ntBASIC12.53□□□□□ -0.4
P01788 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
P01788 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P01788 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P01788 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
P01788 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
P01788 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
P01788 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
P01788 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
P01788 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
P01788 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.52□□□□□ -0.41
P01788 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
P01788 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
P01788 Gm26039-201ENSMUST00000158152 144 ntBASIC12.52□□□□□ -0.41
P01788 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.52□□□□□ -0.41
P01788 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.52□□□□□ -0.41
P01788 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
P01788 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
P01788 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
P01788 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P01788 BC037039-201ENSMUST00000192003 2205 ntBASIC12.52□□□□□ -0.41
P01788 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P01788 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.51□□□□□ -0.41
P01788 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.51□□□□□ -0.41
P01788 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
P01788 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P01788 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.51□□□□□ -0.41
P01788 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P01788 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
P01788 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P01788 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P01788 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms