Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Abcd4O89016 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.31□□□□□ -0.12
Abcd4O89016 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Abcd4O89016 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Abcd4O89016 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.31□□□□□ -0.12
Abcd4O89016 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.31□□□□□ -0.12
Abcd4O89016 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Abcd4O89016 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.31□□□□□ -0.12
Abcd4O89016 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Abcd4O89016 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Abcd4O89016 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.3□□□□□ -0.12
Abcd4O89016 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Abcd4O89016 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Abcd4O89016 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.29□□□□□ -0.12
Abcd4O89016 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Abcd4O89016 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.29□□□□□ -0.12
Abcd4O89016 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.29□□□□□ -0.12
Abcd4O89016 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.29□□□□□ -0.12
Abcd4O89016 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Abcd4O89016 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Abcd4O89016 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Abcd4O89016 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Abcd4O89016 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.28□□□□□ -0.12
Abcd4O89016 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.28□□□□□ -0.12
Abcd4O89016 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.28□□□□□ -0.12
Abcd4O89016 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Abcd4O89016 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.28□□□□□ -0.12
Abcd4O89016 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.28□□□□□ -0.12
Abcd4O89016 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Abcd4O89016 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms