Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sh2d1aO88890 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.23□□□□□ -0.61
Sh2d1aO88890 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Gm10231-201ENSMUST00000181584 441 ntBASIC11.23□□□□□ -0.61
Sh2d1aO88890 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Gm10175-202ENSMUST00000208752 441 ntBASIC11.23□□□□□ -0.61
Sh2d1aO88890 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.23□□□□□ -0.61
Sh2d1aO88890 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.23□□□□□ -0.61
Sh2d1aO88890 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sh2d1aO88890 Prob1-201ENSMUST00000097619 3021 ntBASIC11.22□□□□□ -0.61
Sh2d1aO88890 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.22□□□□□ -0.61
Sh2d1aO88890 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Gm10013-201ENSMUST00000106074 672 ntBASIC11.22□□□□□ -0.61
Sh2d1aO88890 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.22□□□□□ -0.61
Sh2d1aO88890 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sh2d1aO88890 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.21□□□□□ -0.61
Sh2d1aO88890 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Sh2d1aO88890 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms