Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.17□□□□□ -0.14
Col5a1O88207 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.17□□□□□ -0.14
Col5a1O88207 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.17□□□□□ -0.14
Col5a1O88207 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.17□□□□□ -0.14
Col5a1O88207 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Col5a1O88207 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col5a1O88207 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a1O88207 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col5a1O88207 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.16□□□□□ -0.14
Col5a1O88207 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col5a1O88207 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.16□□□□□ -0.14
Col5a1O88207 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 Gm7653-201ENSMUST00000214567 508 ntBASIC14.16□□□□□ -0.14
Col5a1O88207 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
Col5a1O88207 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col5a1O88207 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col5a1O88207 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col5a1O88207 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.16□□□□□ -0.14
Col5a1O88207 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col5a1O88207 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col5a1O88207 Mir449b-201ENSMUST00000104833 80 ntBASIC14.15□□□□□ -0.14
Col5a1O88207 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.15□□□□□ -0.14
Col5a1O88207 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col5a1O88207 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col5a1O88207 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.15□□□□□ -0.14
Col5a1O88207 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.15□□□□□ -0.14
Col5a1O88207 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
Col5a1O88207 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.15□□□□□ -0.14
Col5a1O88207 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.15□□□□□ -0.14
Col5a1O88207 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col5a1O88207 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.15□□□□□ -0.14
Col5a1O88207 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col5a1O88207 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col5a1O88207 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Col5a1O88207 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Col5a1O88207 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Gm12008-201ENSMUST00000117791 755 ntBASIC14.14□□□□□ -0.15
Col5a1O88207 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.14□□□□□ -0.15
Col5a1O88207 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.14□□□□□ -0.15
Col5a1O88207 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col5a1O88207 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col5a1O88207 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms