Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.9■□□□□ 0.78
Vamp4O70480 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vamp4O70480 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.9■□□□□ 0.78
Vamp4O70480 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.89■□□□□ 0.78
Vamp4O70480 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.89■□□□□ 0.78
Vamp4O70480 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Vamp4O70480 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.89■□□□□ 0.77
Vamp4O70480 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Mir5131-201ENSMUST00000175426 93 ntBASIC19.89■□□□□ 0.77
Vamp4O70480 Gm18195-201ENSMUST00000207604 706 ntBASIC19.89■□□□□ 0.77
Vamp4O70480 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.89■□□□□ 0.77
Vamp4O70480 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.89■□□□□ 0.77
Vamp4O70480 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.89■□□□□ 0.77
Vamp4O70480 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.89■□□□□ 0.77
Vamp4O70480 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Vamp4O70480 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vamp4O70480 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.88■□□□□ 0.77
Vamp4O70480 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Gm15173-201ENSMUST00000122049 433 ntBASIC19.88■□□□□ 0.77
Vamp4O70480 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.88■□□□□ 0.77
Vamp4O70480 Gm6550-201ENSMUST00000187574 993 ntBASIC19.88■□□□□ 0.77
Vamp4O70480 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.88■□□□□ 0.77
Vamp4O70480 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.88■□□□□ 0.77
Vamp4O70480 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.88■□□□□ 0.77
Vamp4O70480 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vamp4O70480 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vamp4O70480 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Vamp4O70480 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Gm12350-201ENSMUST00000121208 462 ntBASIC19.87■□□□□ 0.77
Vamp4O70480 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vamp4O70480 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.87■□□□□ 0.77
Vamp4O70480 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Prob1-201ENSMUST00000097619 3021 ntBASIC19.87■□□□□ 0.77
Vamp4O70480 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vamp4O70480 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Vamp4O70480 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.86■□□□□ 0.77
Vamp4O70480 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.86■□□□□ 0.77
Vamp4O70480 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Vamp4O70480 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.86■□□□□ 0.77
Vamp4O70480 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.86■□□□□ 0.77
Vamp4O70480 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.86■□□□□ 0.77
Vamp4O70480 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vamp4O70480 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Vamp4O70480 Gm2651-201ENSMUST00000203560 838 ntBASIC19.85■□□□□ 0.77
Vamp4O70480 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Vamp4O70480 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.85■□□□□ 0.77
Vamp4O70480 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.85■□□□□ 0.77
Vamp4O70480 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vamp4O70480 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vamp4O70480 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.85■□□□□ 0.77
Vamp4O70480 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms