Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pdlim1O70400 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.61■□□□□ 0.09
Pdlim1O70400 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.6■□□□□ 0.09
Pdlim1O70400 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Pdlim1O70400 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pdlim1O70400 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Pdlim1O70400 Gm8097-201ENSMUST00000117903 829 ntBASIC15.6■□□□□ 0.09
Pdlim1O70400 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pdlim1O70400 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pdlim1O70400 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Gm8344-201ENSMUST00000119813 856 ntBASIC15.59■□□□□ 0.09
Pdlim1O70400 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Rps4l-201ENSMUST00000071745 943 ntBASIC15.59■□□□□ 0.09
Pdlim1O70400 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pdlim1O70400 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pdlim1O70400 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pdlim1O70400 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pdlim1O70400 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pdlim1O70400 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim1O70400 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim1O70400 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.58■□□□□ 0.09
Pdlim1O70400 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim1O70400 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim1O70400 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pdlim1O70400 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.58■□□□□ 0.08
Pdlim1O70400 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Gm4535-201ENSMUST00000182274 558 ntBASIC15.58■□□□□ 0.08
Pdlim1O70400 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.58■□□□□ 0.08
Pdlim1O70400 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Gm10355-201ENSMUST00000097146 517 ntBASIC15.58■□□□□ 0.08
Pdlim1O70400 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pdlim1O70400 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pdlim1O70400 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Pdlim1O70400 Gm19164-201ENSMUST00000210667 640 ntBASIC15.57■□□□□ 0.08
Pdlim1O70400 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pdlim1O70400 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms