Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Pdlim3O70209 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdlim3O70209 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pdlim3O70209 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
Pdlim3O70209 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.37□□□□□ -0.11
Pdlim3O70209 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pdlim3O70209 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pdlim3O70209 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.37□□□□□ -0.11
Pdlim3O70209 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdlim3O70209 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdlim3O70209 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.36□□□□□ -0.11
Pdlim3O70209 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.36□□□□□ -0.11
Pdlim3O70209 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pdlim3O70209 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdlim3O70209 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pdlim3O70209 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pdlim3O70209 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.34□□□□□ -0.11
Pdlim3O70209 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pdlim3O70209 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pdlim3O70209 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms