Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mmp8O70138 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp8O70138 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Mmp8O70138 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.27■□□□□ 0.68
Mmp8O70138 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.27■□□□□ 0.68
Mmp8O70138 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp8O70138 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp8O70138 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.26■□□□□ 0.67
Mmp8O70138 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Mmp8O70138 Gm8344-201ENSMUST00000119813 856 ntBASIC19.26■□□□□ 0.67
Mmp8O70138 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.26■□□□□ 0.67
Mmp8O70138 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mmp8O70138 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.26■□□□□ 0.67
Mmp8O70138 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.26■□□□□ 0.67
Mmp8O70138 Rps4l-201ENSMUST00000071745 943 ntBASIC19.26■□□□□ 0.67
Mmp8O70138 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp8O70138 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Mmp8O70138 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.25■□□□□ 0.67
Mmp8O70138 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mmp8O70138 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.25■□□□□ 0.67
Mmp8O70138 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp8O70138 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp8O70138 Gm27646-201ENSMUST00000183989 110 ntBASIC19.25■□□□□ 0.67
Mmp8O70138 Gm19164-201ENSMUST00000210667 640 ntBASIC19.25■□□□□ 0.67
Mmp8O70138 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Mmp8O70138 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp8O70138 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp8O70138 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mmp8O70138 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp8O70138 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Mmp8O70138 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Gm25990-201ENSMUST00000102440 86 ntBASIC19.24■□□□□ 0.67
Mmp8O70138 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp8O70138 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.24■□□□□ 0.67
Mmp8O70138 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.24■□□□□ 0.67
Mmp8O70138 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp8O70138 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp8O70138 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp8O70138 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms