Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cntnap1O54991 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.24■□□□□ 0.83
Cntnap1O54991 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cntnap1O54991 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Gm4875-201ENSMUST00000118257 786 ntBASIC20.23■□□□□ 0.83
Cntnap1O54991 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Gm5035-201ENSMUST00000215581 927 ntBASIC20.23■□□□□ 0.83
Cntnap1O54991 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.23■□□□□ 0.83
Cntnap1O54991 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cntnap1O54991 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntnap1O54991 Mir1247-201ENSMUST00000116706 82 ntBASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm12742-201ENSMUST00000117326 410 ntBASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm15806-201ENSMUST00000120696 955 ntBASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm16026-204ENSMUST00000162652 683 ntBASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm31326-201ENSMUST00000191856 1048 ntBASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntnap1O54991 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntnap1O54991 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntnap1O54991 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntnap1O54991 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntnap1O54991 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Mir3547-201ENSMUST00000175461 88 ntBASIC20.21■□□□□ 0.83
Cntnap1O54991 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC20.21■□□□□ 0.83
Cntnap1O54991 Gm20445-201ENSMUST00000061905 565 ntBASIC20.21■□□□□ 0.83
Cntnap1O54991 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Cntnap1O54991 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC20.21■□□□□ 0.83
Cntnap1O54991 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.21■□□□□ 0.83
Cntnap1O54991 Gm12957-201ENSMUST00000117835 377 ntBASIC20.21■□□□□ 0.83
Cntnap1O54991 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.21■□□□□ 0.83
Cntnap1O54991 Gm8318-201ENSMUST00000182954 872 ntBASIC20.21■□□□□ 0.83
Cntnap1O54991 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntnap1O54991 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Cntnap1O54991 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cntnap1O54991 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Cntnap1O54991 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.2■□□□□ 0.82
Cntnap1O54991 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cntnap1O54991 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cntnap1O54991 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.2■□□□□ 0.82
Cntnap1O54991 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cntnap1O54991 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cntnap1O54991 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Cntnap1O54991 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cntnap1O54991 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap1O54991 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap1O54991 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC20.18■□□□□ 0.82
Cntnap1O54991 Gm43703-201ENSMUST00000200523 763 ntBASIC20.18■□□□□ 0.82
Cntnap1O54991 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.18■□□□□ 0.82
Cntnap1O54991 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.18■□□□□ 0.82
Cntnap1O54991 Gm18624-201ENSMUST00000220966 658 ntBASIC20.18■□□□□ 0.82
Cntnap1O54991 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cntnap1O54991 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cntnap1O54991 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms