Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Banf1O54962 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Banf1O54962 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Banf1O54962 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.13■□□□□ 0.17
Banf1O54962 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Banf1O54962 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.12■□□□□ 0.17
Banf1O54962 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.12■□□□□ 0.17
Banf1O54962 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Mir770-201ENSMUST00000103252 94 ntBASIC16.12■□□□□ 0.17
Banf1O54962 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Banf1O54962 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.12■□□□□ 0.17
Banf1O54962 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Gm10052-201ENSMUST00000168019 960 ntBASIC16.12■□□□□ 0.17
Banf1O54962 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Gm7729-201ENSMUST00000050143 801 ntBASIC16.12■□□□□ 0.17
Banf1O54962 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Banf1O54962 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.12■□□□□ 0.17
Banf1O54962 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Banf1O54962 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Banf1O54962 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Banf1O54962 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
Banf1O54962 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Banf1O54962 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.11■□□□□ 0.17
Banf1O54962 Gm11355-201ENSMUST00000121120 306 ntBASIC16.11■□□□□ 0.17
Banf1O54962 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Gm44430-201ENSMUST00000203376 995 ntBASIC16.11■□□□□ 0.17
Banf1O54962 Gm18101-201ENSMUST00000215769 548 ntBASIC16.11■□□□□ 0.17
Banf1O54962 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Banf1O54962 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Banf1O54962 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.11■□□□□ 0.17
Banf1O54962 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Banf1O54962 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Banf1O54962 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Sybu-209ENSMUST00000228639 4113 ntBASIC16.1■□□□□ 0.17
Banf1O54962 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Banf1O54962 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.1■□□□□ 0.17
Banf1O54962 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Gm6433-201ENSMUST00000118634 875 ntBASIC16.1■□□□□ 0.17
Banf1O54962 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.1■□□□□ 0.17
Banf1O54962 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Banf1O54962 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Banf1O54962 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 BC037039-201ENSMUST00000192003 2205 ntBASIC16.1■□□□□ 0.17
Banf1O54962 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.1■□□□□ 0.17
Banf1O54962 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Banf1O54962 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Banf1O54962 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.1■□□□□ 0.17
Banf1O54962 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Banf1O54962 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.09■□□□□ 0.17
Banf1O54962 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.09■□□□□ 0.17
Banf1O54962 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Gm18032-201ENSMUST00000222541 538 ntBASIC16.09■□□□□ 0.17
Banf1O54962 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Banf1O54962 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Banf1O54962 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms