Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Limk2O54785 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.02■□□□□ 0.16
Limk2O54785 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 Gm25745-201ENSMUST00000174945 133 ntBASIC16.02■□□□□ 0.16
Limk2O54785 Mir5131-201ENSMUST00000175426 93 ntBASIC16.02■□□□□ 0.16
Limk2O54785 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.02■□□□□ 0.16
Limk2O54785 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.02■□□□□ 0.16
Limk2O54785 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Limk2O54785 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Limk2O54785 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limk2O54785 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limk2O54785 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.02■□□□□ 0.15
Limk2O54785 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Limk2O54785 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.01■□□□□ 0.15
Limk2O54785 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.01■□□□□ 0.15
Limk2O54785 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Limk2O54785 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.01■□□□□ 0.15
Limk2O54785 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.01■□□□□ 0.15
Limk2O54785 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Limk2O54785 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Limk2O54785 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limk2O54785 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Limk2O54785 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Limk2O54785 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16■□□□□ 0.15
Limk2O54785 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Limk2O54785 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16■□□□□ 0.15
Limk2O54785 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16■□□□□ 0.15
Limk2O54785 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Limk2O54785 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Limk2O54785 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Limk2O54785 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limk2O54785 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Limk2O54785 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Limk2O54785 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Limk2O54785 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Dancr-204ENSMUST00000132389 2347 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Limk2O54785 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.99■□□□□ 0.15
Limk2O54785 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.99■□□□□ 0.15
Limk2O54785 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Limk2O54785 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.99■□□□□ 0.15
Limk2O54785 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44357-201ENSMUST00000195897 142 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm19658-201ENSMUST00000196231 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44367-201ENSMUST00000196836 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44350-201ENSMUST00000197197 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44390-201ENSMUST00000197533 144 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44313-201ENSMUST00000198018 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44486-201ENSMUST00000198508 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44314-201ENSMUST00000199263 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44394-201ENSMUST00000199558 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44484-201ENSMUST00000199873 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44466-201ENSMUST00000200264 138 ntBASIC15.99■□□□□ 0.15
Limk2O54785 Gm44359-201ENSMUST00000200671 138 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms