Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Matn3O35701 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Matn3O35701 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.42□□□□□ -0.1
Matn3O35701 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Matn3O35701 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.42□□□□□ -0.1
Matn3O35701 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.42□□□□□ -0.1
Matn3O35701 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.42□□□□□ -0.1
Matn3O35701 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Matn3O35701 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Matn3O35701 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Matn3O35701 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Matn3O35701 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Matn3O35701 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.41□□□□□ -0.1
Matn3O35701 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Matn3O35701 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Matn3O35701 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.4□□□□□ -0.1
Matn3O35701 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Matn3O35701 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.4□□□□□ -0.1
Matn3O35701 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.4□□□□□ -0.1
Matn3O35701 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Matn3O35701 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Matn3O35701 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.4□□□□□ -0.1
Matn3O35701 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.39□□□□□ -0.11
Matn3O35701 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.39□□□□□ -0.11
Matn3O35701 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms