Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.16■□□□□ 0.34
Clk2O35491 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clk2O35491 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.15■□□□□ 0.34
Clk2O35491 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.15■□□□□ 0.34
Clk2O35491 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Clk2O35491 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Gm8000-201ENSMUST00000188378 592 ntBASIC17.15■□□□□ 0.34
Clk2O35491 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.15■□□□□ 0.34
Clk2O35491 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clk2O35491 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Clk2O35491 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Clk2O35491 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Clk2O35491 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clk2O35491 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clk2O35491 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Clk2O35491 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clk2O35491 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Gm9727-201ENSMUST00000161387 555 ntBASIC17.14■□□□□ 0.33
Clk2O35491 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.14■□□□□ 0.33
Clk2O35491 Gm45167-201ENSMUST00000208007 322 ntBASIC17.14■□□□□ 0.33
Clk2O35491 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clk2O35491 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.13■□□□□ 0.33
Clk2O35491 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.13■□□□□ 0.33
Clk2O35491 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.13■□□□□ 0.33
Clk2O35491 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.13■□□□□ 0.33
Clk2O35491 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.13■□□□□ 0.33
Clk2O35491 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.13■□□□□ 0.33
Clk2O35491 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.13■□□□□ 0.33
Clk2O35491 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.13■□□□□ 0.33
Clk2O35491 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Clk2O35491 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clk2O35491 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.13■□□□□ 0.33
Clk2O35491 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clk2O35491 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.13■□□□□ 0.33
Clk2O35491 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clk2O35491 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clk2O35491 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms