Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfsf11O35235 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfsf11O35235 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm15378-201ENSMUST00000121894 207 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm38027-201ENSMUST00000192315 235 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.37□□□□□ -0.43
Tnfsf11O35235 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfsf11O35235 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Gm12527-201ENSMUST00000117967 564 ntBASIC12.36□□□□□ -0.43
Tnfsf11O35235 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.36□□□□□ -0.43
Tnfsf11O35235 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms