Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.12□□□□□ -0.15
Alx4O35137 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm30025-201ENSMUST00000218555 728 ntBASIC14.12□□□□□ -0.15
Alx4O35137 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm5417-201ENSMUST00000079706 384 ntBASIC14.12□□□□□ -0.15
Alx4O35137 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Alx4O35137 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.12□□□□□ -0.15
Alx4O35137 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Alx4O35137 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Alx4O35137 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Alx4O35137 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Gm6257-201ENSMUST00000163864 910 ntBASIC14.11□□□□□ -0.15
Alx4O35137 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.11□□□□□ -0.15
Alx4O35137 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.11□□□□□ -0.15
Alx4O35137 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Alx4O35137 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.11□□□□□ -0.15
Alx4O35137 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Alx4O35137 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Alx4O35137 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Alx4O35137 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Alx4O35137 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.1□□□□□ -0.15
Alx4O35137 Gm10052-201ENSMUST00000168019 960 ntBASIC14.1□□□□□ -0.15
Alx4O35137 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.1□□□□□ -0.15
Alx4O35137 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.1□□□□□ -0.15
Alx4O35137 Gm7729-201ENSMUST00000050143 801 ntBASIC14.1□□□□□ -0.15
Alx4O35137 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.1□□□□□ -0.15
Alx4O35137 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.1□□□□□ -0.15
Alx4O35137 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.1□□□□□ -0.15
Alx4O35137 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Alx4O35137 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Alx4O35137 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.09□□□□□ -0.15
Alx4O35137 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Alx4O35137 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms