Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trove2O08848 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trove2O08848 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.27■□□□□ 0.2
Trove2O08848 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trove2O08848 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trove2O08848 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trove2O08848 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.26■□□□□ 0.19
Trove2O08848 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Trove2O08848 Gm11539-201ENSMUST00000119837 557 ntBASIC16.26■□□□□ 0.19
Trove2O08848 Gm13436-201ENSMUST00000120418 567 ntBASIC16.26■□□□□ 0.19
Trove2O08848 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trove2O08848 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.26■□□□□ 0.19
Trove2O08848 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trove2O08848 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trove2O08848 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trove2O08848 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.25■□□□□ 0.19
Trove2O08848 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.25■□□□□ 0.19
Trove2O08848 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.25■□□□□ 0.19
Trove2O08848 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.25■□□□□ 0.19
Trove2O08848 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.25■□□□□ 0.19
Trove2O08848 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.25■□□□□ 0.19
Trove2O08848 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trove2O08848 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trove2O08848 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.25■□□□□ 0.19
Trove2O08848 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trove2O08848 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trove2O08848 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trove2O08848 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.24■□□□□ 0.19
Trove2O08848 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trove2O08848 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trove2O08848 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trove2O08848 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trove2O08848 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trove2O08848 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms