Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.41■□□□□ 0.22
Ebf3O08791 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ebf3O08791 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ebf3O08791 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ebf3O08791 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ebf3O08791 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.4■□□□□ 0.22
Ebf3O08791 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Ebf3O08791 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ebf3O08791 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ebf3O08791 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Ebf3O08791 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ebf3O08791 Gm9172-201ENSMUST00000212092 954 ntBASIC16.4■□□□□ 0.22
Ebf3O08791 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.4■□□□□ 0.22
Ebf3O08791 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ebf3O08791 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ebf3O08791 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.4■□□□□ 0.22
Ebf3O08791 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Ebf3O08791 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ebf3O08791 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.4■□□□□ 0.22
Ebf3O08791 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Ebf3O08791 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Ebf3O08791 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Ebf3O08791 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ebf3O08791 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ebf3O08791 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Gm25406-201ENSMUST00000157599 105 ntBASIC16.39■□□□□ 0.21
Ebf3O08791 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ebf3O08791 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ebf3O08791 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.38■□□□□ 0.21
Ebf3O08791 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.38■□□□□ 0.21
Ebf3O08791 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.38■□□□□ 0.21
Ebf3O08791 Gm27702-201ENSMUST00000184512 56 ntBASIC16.38■□□□□ 0.21
Ebf3O08791 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.38■□□□□ 0.21
Ebf3O08791 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ebf3O08791 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.38■□□□□ 0.21
Ebf3O08791 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ebf3O08791 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.38■□□□□ 0.21
Ebf3O08791 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ebf3O08791 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ebf3O08791 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ebf3O08791 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms