Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm6257-201ENSMUST00000163864 910 ntBASIC18.48■□□□□ 0.55
Tcof1O08784 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Tcof1O08784 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Gm6089-201ENSMUST00000197666 938 ntBASIC18.48■□□□□ 0.55
Tcof1O08784 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.48■□□□□ 0.55
Tcof1O08784 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.48■□□□□ 0.55
Tcof1O08784 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.48■□□□□ 0.55
Tcof1O08784 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcof1O08784 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tcof1O08784 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Tcof1O08784 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.47■□□□□ 0.55
Tcof1O08784 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.47■□□□□ 0.55
Tcof1O08784 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tcof1O08784 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Tcof1O08784 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcof1O08784 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tcof1O08784 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.46■□□□□ 0.55
Tcof1O08784 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tcof1O08784 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tcof1O08784 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tcof1O08784 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Gm7230-201ENSMUST00000173026 815 ntBASIC18.46■□□□□ 0.55
Tcof1O08784 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.46■□□□□ 0.55
Tcof1O08784 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.46■□□□□ 0.55
Tcof1O08784 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.46■□□□□ 0.55
Tcof1O08784 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.46■□□□□ 0.55
Tcof1O08784 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tcof1O08784 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tcof1O08784 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tcof1O08784 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Tcof1O08784 Gm15173-201ENSMUST00000122049 433 ntBASIC18.45■□□□□ 0.54
Tcof1O08784 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.45■□□□□ 0.54
Tcof1O08784 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tcof1O08784 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Tcof1O08784 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.45■□□□□ 0.54
Tcof1O08784 Gm27646-201ENSMUST00000183989 110 ntBASIC18.45■□□□□ 0.54
Tcof1O08784 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcof1O08784 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tcof1O08784 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.44■□□□□ 0.54
Tcof1O08784 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.44■□□□□ 0.54
Tcof1O08784 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcof1O08784 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Tcof1O08784 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms